October 24, Wednesday
 Aécio Solano Rodrigues Santos
 Brazil
 Master Student in Computer Science
 Federal University of Minas Gerais (UFMG)
 Computer Science Department
 Laboratory for Treating Information (LATIN)
 Recommender Systems
 Information Retrieval
 Web Search Engine:
 Web Crawling, Indexing, Query Processing...
 Web Crawler is a software that automatically discovers
Web pages and downloads those into a local repository
 Given resources are limited, it is not possible to
download all pages
 Web Crawl Scheduling:
 What pages should be downloaded first?
 When a page should be updated?
Aline Duarte Bessa
(Brazilian)
MSc candidate at Federal University of Minas Gerais
I am currently involved with the generation of useful movie
recommendations for users. In my research, I investigate a bayesian
probabilistical framework that takes into account:
The fact that, in a recommended movie list, the utility of movies
interfere with one another;
l
the fact that a recommended movie list should maximize the
probability of having at least one item that is actually selected
by an user;
l
the fact that the recommended movie list should cover, as much
as possible, all different hues present in a particular user tastes.
l
I am currently mining ratings patterns at the MovieLens datasets
(http://www.grouplens.org/node/73).
Name: Anderson Chaves Carniel
Nationality: Brazilian
Academic Institution: Federal University of São Carlos
Databases
Data Warehousing and OLAP (Online Analytical
Processing)
Geographic Data Warehousing
My current research in the master’s program:
Incorporating vague spatial data in geographic data
warehouses
Arimatéa de Carvalho XIMENES
Brazilian
Carioca
PhD candidate in Science (Biology)
Université Libre de Bruxelles (ULB)
joint PhD at Vrije Universiteit Brussel (VUB)
Granteed by: Fonds de la Recherche Scientifique (FNRS)
M.Sc. Remote Sensing (National Institute for Space Research - INPE)
Specialization of Enviromnent and Analysis Assessment (PUC-RJ
B.Sc. Biological Science (University of Santa Úrsula - USU)
Macroecology of mangroves
• Biogeographical and ecoregions regions
of mangroves using species distribution
• Determine global analysis of threats
and environmental variables .
of mangrove plant species using
socio-environmental indicators.
Self-Organizing Maps
Crisci et al., 2006
Brazilian Research Student
Soil Biotechnology Lab – Embrapa Soja
Biotechnology Master’s Degree at
Universidade Estudual de Londrina (“State
University of Londrina”)
Embrapa Soja
LNCC
Embrapa Cerrados
Embrapa Agropecuária Oeste
Embrapa Roraima
Sctructural and functional
genomics of diazotrophs allowed
FEPAGRO
for commercial inoculants
Roth, E. and G. Stacey (1989) production in BrazilMain Project
Structural and functional
genomics of Bradyrhizobium
japonicum
(CPAC 7 and CPAC 15 strains)
9 research groups in
association
Sub-Project
9 reasearchers
Mariangela Hungria
(Supervisor)
Genome annotation
My work!
Membrane transport
UFPR
Campus
Palotina
UEL
IPA
Asher Watts,
Canadian
MSc. in Software Engineering and Intelligent Systems
Department of Electrical and Computer Engineering
University of Alberta
General Interests:
●
Computation Intelligence
●
Energy and the Environment
Research Areas:
Energy Harvesting Systems
●Power Management
●Remote Monitoring
●
Name: Avatharam Ganivada
Nation: India
Academic Institution:
Indian Statistical Institute
Title: Granular Neural Networks for Pattern
Recognition and Granular Mining
Classification and clustering of real life data sets, including
microarray gene expression data, based on the proposed
granular neural networks.
 A new fuzzy rough entropy measure for validating the
clustering solutions is proposed by comparing the existing
measures, Beta –index and DB-index.
Future Work:
- Proposing a new granular neural network for
selecting salient features of real-life data sets.
Student Presentation
My name: Bernardo Gonçalves
My nationality: Brazilian
My institution: LNCC, in Petrópolis/RJ, Brazil –
National Laboratory for Scientific Computing
DEXL LAB – Extreme Data Lab
Prof. Fabio Porto
PhD Project, supervised by Prof. Fabio Porto (LNCC)
A Database Model for Scientific Hypotheses
Introduction of hypotheses, models and phenomena data representations
into the eScience framework;
●
Investigation of the conceptual structure (db-model) of scientific research
life-cycles from the perspective of the scientist;
●
Development of a db-model (both DDL and DML) for the effective
representation and management of those entities all together with data.
●
Home: Malaysia; Similar to Brazil in many aspects…
Second home: Edmonton, Canada
Surface mining of oil
sands
Oil sands tailings pond
Next-generation
sequencing
Using system biology approaches in understanding degradation of hydrocarbon
pollutants
In the lab, I do:
A) Bioinformatics
--Metagenomics and genomics
--Metatranscriptomics
B) Bench work
Bruno Brandoli, Brazilian Ph.D. Student
Department of Computational Physics
USP - University of São Paulo, Brazil
- Swarm
Intelligence
- Fractal Geometry
- Complex Network
- Plant Pathology Identification
- Nanomaterial Quality Assessment
Caillet Dornelles Marinho
Brazilian
Degree in agronomy
(University of Viçosa - Brazil)
Specialist in Biotechnology
(University of Maringá - Brazil)
M.Sc. in Genetics and Plant Breeding
(University of North Fluminense - Brazil)
D. Sc. in Genetics and Breeding (in progress)
(University of Viçosa - Brazil)
Breeding Program of Sugarcane – University of Viçosa
Rede Interuniversitária para o Desenvolvimento do Setor
Sucroalcooleiro - RIDESA
(Interuniversity network for the development of the sugar-energy
Sector)
Project: Early identification of potential clones of sugarcane under
different selection strategies
Focus: Genome Wide Selection (GWS)
Brazilian nationality
PhD student
Program of Genetics and Molecular Biology
Institute of Biology - University of Campinas (UNICAMP)
Supervisor: Prof. Dr. Marcelo Menossi Teixeira
Scholarship: CNPq (140767/2012-6) and FAPESP (2012/13920-8)
Project title: “Transcriptomic analysis of the effect of the hormone
ethylene in sugarcane ripening”
The hormone ethylene in sugarcane ripening
Developmental stages
Chemical genetics
Technological parameters
Hormone profiles
Photosynthesis
Lignin and cellulose
Enzymology
Ethylene inhibitor
Ethylene indutor
8-10 months
(ripening)
Control
RNA-Seq
Assembly
de novo
HPAEC-PAD
reference
GC-MS
Normalization
Differential gene
expression
RT-qPCR validation
Main analysis work flow
Collaborations and co-workers:
gene onthology
UNESP (Dr. Marcelo Silva)
IAC (Dra. Ana Lagôa and Ms. Guilherme Roberto)
USP (Dra. Glaucia Souza, Dr. Marcos Buckeridge, and
Dr. Igor Polikarpov).
Cristiane Pontes de Oliveira
Brazilian
PostDoc at Chemistry Institute of São Carlos, IQSC
University of São Paulo, USP
Glycerol
electrocatalysis
under oscillatory
regime
Name: Cristiano Premebida
Nationality: Brazilian
Affiliation: Institute of Systems and Robotics (ISR),
University of Coimbra
Research work summary: In general, I have developed
research work on the field of mobile robotics,
autonomous vehicles, object tracking, and machine
learning. In particular, my recent research topics of
interest are:
1) perception systems for robots and autonomous
vehicles
2) Sensor fusion, e.g. LIDAR, GPS and cameras
3) pattern recognition
Silicon Processing
Photolithographic masks
Micro fluidics
Use the Silicon processing
potentialities for ethanol
fermentation monitoring
Information and Communication Technologies Research Institute
ITIC, Universidad Nacional de Cuyo
Mendoza, Argentina
Candidate for the degree of Ph.D. In Computer Science,
Universidad Nacional del Centro de la Provincia de Buenos Aires
Tandil, Buenos Aires, Argentina
Ph.D. Fellowship granted by the Argentine National Scientific and Technical
Research Council (CONICET)
• Scheduling of Workflow applications on Distributed Computing environments
• Performance prediction methods
• Applications in the areas of Computational Mechanics and Bioinformatics
• Parameter Sweeping of Necking Problems (Engineering Faculty, UNCuyo)
• Predictive Classification of Gene Expression Samples (CTU, IDA, Czech Republic)
• Cross-gene cross-organism microarray analysis (CTU, IDA, Czech Republic)
Current Position
• Ph.D. student in Electronic Engineering.
• Member of Digital Image Processing Group.
Institutions
• School of Engineering, Mar del Plata National University,
Argentina.
• National Council of Scientific and Technical Research,
CONICET, Argentina.
Email: [email protected]
Current Work
• Type-2 Fuzzy Logic models applied to medical
image segmentation
T1
Gris
Hipointenso
Fuzzy
Predicates
0.8
0.6
T2
0.4
Negro
1
Oscuro Gris
Hiperint. Blanco
0.2
0
Nivel de pertenencia
 Extension of predicates logic to Type-2
Fuzzy Sets;
Nivel de pertenencia
Negro Oscuro
1
50
0.8
0.6
100
150
Intensidad de gris
200
250
0.4
0.2
 Knowledge extraction from data for
automatic design of fuzzy classification
systems.
0
50
100
150
Intensidad de gris
200
250
Edgar Andrés Ochoa Cruz
Bogotá – Colombia
PhD in Biotechnology
Universidade de São Paulo, Brazil
Sugarcane Genomics
Synthetic Biology
Energy and biofuel applications
Molecular tools (Plug&Play plasmid)
Reverse bioinformatics (Computation in biological organisms)
 Eduardo Cotrin Teixeira, Brazilian
 Ph.D.
Student (since 2011) in Computer Science at
Institute of Mathematics and Statistics (IME) University of São Paulo (USP)
 Supervisors: João Eduardo Ferreira / Kelly Rosa Braghetto –
Database Group
 Assistant Professor (since 2007) at Federal
University of Technology – Paraná (UTFPR)
My Current Work
 Models and tools for Workflow management
 Scientific Workflows
 Databases (and Cloud Computing)
Eduardo de Paula Miranda
[email protected]
(Brazilian)
State University of Campinas
Problem
Wide variety of information systems aimed at cataloging phenotypic
descriptions of living beings, which adopt heterogeneous models,
hampering data integration.
Goal
To Integrate phenotype-related heterogeneous models via alignment
of their metamodels.
Contributions
•Semi-automatic approach to connect free text phenotypic
descriptions to equivalent ontology-based descriptions;
•Automated integration of the large volume of existing phenotypic
descriptions.
Eliana Bohórquez
Physicist and
Computer Science MSc student
Multidisciplinary projects:
HPC and Scientific Research
Computational support:
Adaptation and use of infrastructure – Parallel Apps.
CagA Project
Docking and MD
A: A CagA(1-876) dimer in the crystal - Hayashi et
al, 2012
Nacionality: Brazilian
Institution: Univ. Estadual Paulista “Júlio de Mesquita Filho”
Bioscience Institute – Physics Department
Botucatu – São Paulo – Brazil
Keywords: Decision trees, essential genes, synthetic lethality,
FBA
experimental data
+
centralities
+
predictor algorithm
MODEL
Graduate Degree in Biology
Preparation of broth for the production of sugar
Production of Ethanol
Great Expectations Development Sector in the State of Mato Grosso do Sul
Post-Graduate: Mestrado em Recursos Naturais
Universidade Estadual de Mato Grosso do Sul
Programa Interdisciplinar:
Physics: FTIR, NMR, GC, RI
Chemistry: Physical chemistry
Biology: Botanical Aspects
Search:
Production of biodiesel by oil sources.
The horse-peanut (Arachis hypogaea var. Virginia L.)
Evaluation of yield esters by base catalysis and heterogeneous