57º Congresso Brasileiro de Genética
Resumos do 57º Congresso Brasileiro de Genética • 30 de agosto a 2 de setembro de 2011
Centro de Convenções do Hotel Monte Real Resort • Águas de Lindóia • SP • Brasil
www.sbg.org.br - ISBN 978-85-89109-06-2
191
Genetic structure and diversity of grapevine
accessions using Tvv1: a Vitis retrotransposon
based marker
Sant’Ana, GC1, 2; Ferreira, JL1; Borém, A2; Pasqual, M3; Cançado, GMA1
1Plant Biotechnology Laboratory, Agricultural Research Agency of Minas Gerais (EPAMIG). 2Plant Science Department,
Universidade Federal de Viçosa. 3Plant Science Department, Universidade Federal de Lavras.
[email protected]
Keywords: Vitis spp., DNA fingerprinting, Genotyping, Genetic Resource, PCR
Introduction: The grapevine is a perennial fruit of greater economic importance worldwide. The correct identification and the knowledge about the genetic diversity are fundamental for rational management and use of grapevine
germplasm. Tvv1 is a highly variable untranslated leader region (UTL) and constitute a particular class of short Long
Terminal Repeats (LTRs) retroelements. The use of retrotransposon sequences as Tvv1 as a source of informative markers might optimize the process of genotyping due its high ability of sampling the genome at several loci
simultaneously. Objective: To analyze the genetic diversity of main grapevine varieties from a germplasm collection
kept by the Agricultural Research Agency of Minas Gerais (EPAMIG). Methods: The DNA of 26 grapevines was
extracted by the CTAB method, amplified using the Tvv1 primers - Pltr1 (5’CCTAATTCAGGACTCTCAAT3’ - forward) and P17 (5’CTAGAATTCTTACTCTCTTCC3’ – reverse). After that, the samples were run in electrophoresis
at 6% denaturing poliacrilamide gels, and then, stained in a silver nitrate. Results: In this study were identified 18
polymorphic amplified bands that allowed a very sensitive DNA fingerprinting. Among the 26 cultivars examined,
25 different SSR profiles were detected with exception to ‘Niagara Branca’ and ‘Niagara Rosada’ which were not discriminated. ‘Niagara Rosada’ was originating from a putative single mutation of ‘Niagara Branca’, and thereby they
do not have profile differentiation resolved by this marker technique. The phylogenetic structure analysis showed
two main groups (scion and rootstocks) agreeing with the genetic pedigree of these varieties. In the principal coordinate analysis, the two groups were well dispersed in the bi-dimensional graph, showing 65.25% of explanation
considering the two first axes together. Furthermore in the phenetic analysis, those two groups were well scattered
in the Neighbor joining tree, showing agreement between the several analyzes used. Conclusion: These results evidenced the usefulness of Tvv1 marker during the DNA fingerprinting of grapevine, but they also showed the lack
of efficiency of this marker during the discrimination of structured sub-groups, within scion and rootstock groups.
Financial support: IFS, FAPEMIG, CNPq, CAPES, FINEP, and EMBRAPA.
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Genetic structure and diversity of grapevine accessions using Tvv1